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Title Parallel computing for bioinformatics and computational biology : models, enabling technologies, and case studies / edited by Albert Y. Zomaya
Published Hoboken, N.J. : Wiley-Interscience, [2006]
©2006
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Description 1 online resource (xxix, 782 pages) : illustrations
Series Wiley series on parallel and distributed computing
Wiley series on parallel and distributed computing.
Contents Parallel and evolutionary approaches to computational biology / Nouhad Rizk -- Parallel Monte Carlo simulation of HIV molecular evolution in response to immune surveillance / Jack da Silva -- Differential evolutionary algorithms for in vivo dynamic analysis of glycolysis and pentose phosphate pathway in Escherichia coli / Andrei Doncescu -- Compute-intensive simulations for cellular models / Kevin Burrage -- Parallel computation in simulating diffusion and deformation in human brain / Jun Zhang -- Computational molecular biology / Azzedine Boukerche -- Special-purpose computing for biological sequence analysis / Bertil Schmidt -- Multiple sequence alignment in parallel on a cluster of workstations / Amitava Datta -- Searching sequence databases using high performance BLASTs / Xue Wu -- Parallel implementations of local sequence alignment: hardware and software / Vipin Chaudhary -- Parallel computing in the analysis of gene expression relationships / Robert Martino -- Parallel algorithms for solving the fragment assembly problem in DNA strands / Enrique Alba -- A cooperative genetic algorithm for knowledge discovery in microarray experiments / Mohammad Khabzaoui -- Parallel and distributed computation of large phylogenetic trees / Alexandros P. Stamatakis -- Phylogenetic parameter estimation on COWs / Ekkehard Petzold -- High-performance phylogeny reconstruction under maximum parsimony / Tiffani Williams -- Protein folding with the parallel replica exchange molecular dynamics method / Ruhong Zhou -- High performance alignment methods for protein threading / R. Andonov -- Parallel evolutionary computations in discerning protein structures / Richard O. Day -- A brief Overview of Grid activities for bioinformatics and health applications / Ali Al Mazari -- Parallel algorithms for bioinformatics / Shahid H. Bokhari -- Cluster and grid infrastructure for computational chemistry and biochemistry / Kim K. Baldridge -- Distributed workflows in bioinformatics / Arun Krishnan -- Molecular structure determination on a computational and data grid / Russ Miller -- GIPSY : a problem solving environment for bioinformatics applications / Rajendra R. Joshi -- TaskSpaces : a software framework for parallel bioinformatics on computational grids / Hans De Sterck -- The organic grid : self-organizing computation on desktop grids / Arjav J. Chakrvarti -- FPGA Computing in modern bioinformatics / H. Simmler -- Virtual microscopy : distributed image storage, retrieval, analysis, and visualization / T. Pan
Summary Parallel Computing for Bioinformatics is the first book to deal with the topic of parallel computing and bioinformatics. Written by renowned experts and well-reputed researchers in this emerging field, it provides an opportunity for researchers to explore the rich and complex subject of?Bioinformatics?
Bibliography Includes bibliographical references and index
Notes Print version record
Subject Bioinformatics.
Computational biology.
Parallel processing (Electronic computers)
Computational Biology.
Computing Methodologies.
Form Electronic book
Author Zomaya, Albert Y., editor
Wiley InterScience (Online service), issuing body
ISBN 0471756490 (electronic bk.)
1280462701
9780471756491 (electronic bk.)
9781280462702
(cloth)