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Book Cover
E-book

Title Plant pathogenic fungi and oomycetes : methods and protocols / edited by Wenbo Ma, Thomas Wolpert
Published New York : Humana Press : Springer, 2018

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Description 1 online resource (xi, 292 pages) : illustrations (some color)
Series Methods in molecular biology, 1940-6029 ; 1848
Methods in molecular biology (Clifton, N.J.) ; v. 1848. 1064-3745
Contents Quantifying re-association of a facultative endohyphal bacterium with a filamentous fungus / David A. Baltrus, Joseph Spraker, and A. Elizabeth Arnold -- Characterizing Mycoviruses / Mahtab Peyambari and Marilyn J. Roossinck -- Analysis of secondary metabolites from plant endophytic fungi / Jiajia Liu and Gang Liu -- Protocols for investigating the leaf mycobiome using high-throughput NA sequencing / Shawn P. Brown, Devin R. Leopold, and Posy E. Busby -- Characterizing small RNAs in filamentous fungi using the rice blast fungus, Magnaporthe oryzae, as an example / Vidhyavathi Raman, Blake C. Meyers, Ralph A. Dean, and Nicole M. Donofrio -- Plant Ssmall RNAs responsive to fungal pathogen infection / Yun Jin and Hui-Shan Guo -- Sequential phosphopeptide enrichment for phosphoproteome analysis of filamentous fungi : a test case using Magnaporthe oryzae / Yeonyee Oh, William L. Franck, and Ralph A. Dean -- Assays for MAP kinase activation in Magnaporthe oryzae and other plant pathogenic fungi / Xue Zhang, Zhuyun Bian, and Jin-Rong Xu -- Visualizing the movement of Magnaporthe oryzae effector proteins in rice cells during infection / Kiersun Jones and Chang Hyun Khang -- Illuminating phytophthora biology with fluorescent protein tags / Audrey M.V. Ah-Fong, Meenakshi Kagda, and Howard S. Judelson -- Methods for transient gene expression in wild relatives of potato / Sidrat Abdullah and Dennis Halterman -- Host-induced gene silencing (HIGS) for elucidating puccinia gene function in wheat / Chuntao Yin and Scot H. Hulbert -- From short reads to chromosome-scale genome assemblies / Kyle Fletcher and Richard Michelmore -- BLASTmap : a shiny-based application to visualize BLAST results as interactive heat maps and a tool to design gene-specific baits for bespoke target enrichment sequencing / Katie Baker, Gordon Stephen, Shona Strachan, Miles Armstrong, and Ingo Hein -- Computational protocol to analyze metatranscriptomic data capturing fungal-host interactions / Yong Zhang, Li Guo, and Li-Jun Ma -- Application of the cre/iox system to construct auxotrophic markers for quantitative genetic analyses in Fusarium graminearum / Lanelle R. Connolly, Allyson A. Erlendson, Corinne M. Fargo, Kendra K. Jackson, Morgan M.G. Pelker, Jacob W. Mazzola, Mark S. Geisler, and Michael Freitag -- Protocol of Phytophthora capsici transformation using the CRISPR-Cas9 system / Zhiwen Wang, Brett M. Tyler, and Xili Liu -- Generating gene silenced mutants in Phytophthora sojae / Yao Zhao, Yufei Li, Min Qiu, Wenbo Ma, and Yuanchao Wang
Bibliography Includes bibliographical reference and index
Notes Online resource; title from PDF title page (SpringerLink, viewed September 10, 2018)
Subject Phytopathogenic microorganisms -- Laboratory manuals
Plant diseases.
Fungi.
Mushrooms.
Oomycetes.
Plant Diseases
Fungi
Oomycetes
Magnaporthe
Botany & plant sciences.
Science -- Life Sciences -- Botany.
Plant diseases
Oomycetes
Mushrooms
Fungi
Phytopathogenic microorganisms
Genre/Form Laboratory manuals
Laboratory manuals.
Manuels de laboratoire.
Form Electronic book
Author Ma, Wenbo, editor
Wolpert, Thomas, editor.
ISBN 9781493987245
1493987240