Title Plant systems biology / edited by Dmitry A. Belostotsky

Published New York, NY : Humana Press, 2009

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Description 1 online resource (xv, 408 pages) : illustrations (some color) Series Springer Protocols Methods in molecular biology, 1940-6029 ; 553 Springer protocols (Series) Methods in molecular biology (Clifton, N.J.) ; v. 553 Contents Gene-specific and genome-wide ChIP approaches to study plant transcriptional networks / K. Morohashi, Z. Xie and E. Grotewold -- Genome-wide analysis of RNA-protein interactions in plants / A. Barkan -- Whole-genome microarrays: applications and technical issues / B.D. Gregory and D.A. Belostotsky -- Manipulating large-scale Arabidopsis microarray expression data: identifying dominant expression patterns and biological process enrichment / D.A. Orlando [and others] -- Applications of ultra-high-throughput sequencing / S. Fox, S. Filichkin and T.C. Mockler -- Isolation of plant polysomal mRNA by differential centrifugation and ribosome immunopurification methods / A. Mustroph, P. Juntawong and J. Bailey-Serres -- Chromatin charting: global mapping of epigenetic effects / C. Luo and E. Lam -- Clone-based functional genomics / A. Bleys, M. Karimi and P. Hilson -- Challenges and approaches to statistical design and inference in high-dimensional investigations / G.L. Gadbury, K.A. Garrett and D.B. Allison -- Discrete dynamic modeling with asynchronous update, or how to model complex systems in the absence of quantitative information / S.M. Assmann and R. Albert -- Quantification of variation in expression networks / D.J. Kliebenstein -- Co-expression analysis of metabolic pathways in plants / A. Loraine -- Integration of metabolic reactions and gene regulation / C.H. Yeang -- Applying word-based algorithms: the IMEter / I.F. Korf and A.B. Rose -- Live-imaging and image processing of shoot apical meristems of Arabidopsis thaliana / G.V. Reddy and A. Roy-Chowdhury -- Computer vision as a tool to study plant development / E.P. Spalding -- Metabolomics of plant volatiles / A.V. Qualley and N. Dudareva -- Chemical genomics approaches in plant biology / L. Norambuena, N.V. Raikhel and G.R. Hicks -- Comparison of quantitative metabolite imaging tools and carbon-13 techniques for fluxomics / T. Niittylae [and others] -- Democratization and integration of genomic profiling tools / M.R. Sussman, E.L. Huttlin and D.J. Wohlbach Summary As a fairly new and expansive area of study, plant systems biology has been approached by scientists from fields as varied as plant physiology and astrophysics, creating a wide variety of techniques and methods to further this vital research. In Plant Systems Biology, expert investigators provide cutting-edge chapters dealing with diverse subjects such as systems biology of plant gene expression to analysis of networks, pathways, specific statistical issues and novel computational tools, imaging-based tools as well as chemical genetic, metabolomic and integrative methods that cannot be easily pigeonholed. As a volume in the highly successful Methods in Molecular Biology series, this work provides the kind of detailed description and implementation advice that is crucial for getting optimal results. Authoritative and comprehensive, Plant Systems Biology is an ideal guide for all researchers who wish to contribute to the evolution of the vibrant field of plant biology Analysis bioinformatics planten plants moleculaire biologie molecular biology biologische technieken biological techniques systeembiologie systems biology genregulatie gene regulation genexpressieanalyse genomics protocollen protocols Plant Molecular Biology Moleculaire plantenbiologie Bibliography Includes bibliographical references and index Notes Master and use copy. Digital master created according to Benchmark for Faithful Digital Reproductions of Monographs and Serials, Version 1. Digital Library Federation, December 2002. http://purl.oclc.org/DLF/benchrepro0212 MiAaHDL English Print version record digitized 2010 HathiTrust Digital Library committed to preserve pda MiAaHDL Subject Plant molecular biology. Systems biology. Methodology. Plant physiology. Bioinformatics. Computational biology. Biology. Life sciences. Physical sciences. Methods Laboratory Manuals Systems Biology Plant Physiological Phenomena Computational Biology Publication Formats Phenomena and Processes Investigative Techniques Biology Analytical, Diagnostic and Therapeutic Techniques and Equipment Publication Characteristics Biological Science Disciplines Natural Science Disciplines Disciplines and Occupations methodology. biology. biological sciences. physical sciences. Plant physiology Physical sciences Methodology Life sciences Computational biology Biology Bioinformatics Plant molecular biology Systems biology Biologie des systèmes. Bildverarbeitung Genomik Metabolit Pflanzen Systembiologie Genexpression Computerunterstütztes Verfahren Systembiologie -- Pflanzen. Pflanzen -- Systembiologie. Pflanzen -- Molekularbiologie. Molekularbiologie -- Pflanzen. Biologie moléculaire végétale. Biologie systémique. Genre/Form Laboratory manuals Laboratory manuals. Manuels de laboratoire. Form Electronic book Author Belostotsky, Dmitry A. ISBN 9781603275637 1603275630

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