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Title Plant transposable elements : impact on genome structure and function / Marie-Angèle Grandbastien, Josep M. Casacuberta, editors
Published Berlin ; New York : Springer, ©2012

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Description 1 online resource
Series Topics in current genetics, 1610-2096 ; 24
Topics in current genetics ; 24.
Contents So Many Repeats and So Little Time: How to Classify Transposable Elements / Thomas Wicker -- Transposable Element Annotation in Completely Sequenced Eukaryote Genomes / Timothée Flutre, Emmanuelle Permal, Hadi Quesneville -- Using Nextgen Sequencing to Investigate Genome Size Variation and Transposable Element Content / Concepcion Muñoz-Diez, Clémentine Vitte, Jeffrey Ross-Ibarra -- Genome-Wide Analysis of Transposition Using Next Generation Sequencing Technologies / Moaine Elbaidouri, Olivier Panaud -- Hitching a Ride: Nonautonomous Retrotransposons and Parasitism as a Lifestyle / Alan H. Schulman -- Plant Endogenous Retroviruses? A Case of Mysterious ORFs / Howard M. Laten, Garen D. Gaston -- MITEs, Miniature Elements with a Major Role in Plant Genome Evolution / Hélène Guermonprez, Elizabeth Hénaff, Marta Cifuentes -- Glue for Jumping Elements: Epigenetic Means for Controlling Transposable Elements in Plants / Thierry Pélissier, Olivier Mathieu -- Responses of Transposable Elements to Polyploidy / Christian Parisod, Natacha Senerchia -- Noise or Symphony: Comparative Evolutionary Analysis of Sugarcane Transposable Elements with Other Grasses / Nathalia de Setta, Cushla J. Metcalfe, Guilherme M.Q. Cruz -- Helitron Proliferation and Gene-Fragment Capture / Yubin Li, Hugo K. Dooner -- Transposable Element Exaptation in Plants / Douglas R. Hoen, Thomas E. Bureau -- SINE Exaptation as Cellular Regulators Occurred Numerous Times During Eukaryote Evolution / Jean-Marc Deragon -- LTR Retrotransposons as Controlling Elements of Genome Response to Stress? / Quynh Trang Bui, Marie-Angèle Grandbastien -- Rider Transposon Insertion and Phenotypic Change in Tomato / Ning Jiang, Sofia Visa, Shan Wu, Esther van der Knaap -- Retrotransposons and the Eternal Leaves / Antonella Furini
Summary Transposable elements are DNA sequences with the capacity to move within a genome. Although their presence and impact has long been known, the recent genome-wide analysis of many eukaryotic genomes has uncovered their major role in genome dynamics and function. The present book explains how to recognize and study transposable elements, e.g. by using state-of-the-art strategies based on new-generation sequencing. Moreover, the impact of transposable elements on plant genome structure and function is reviewed in detail and illustrated in examples and case studies. The book is intended both for readers familiar with the field and for newcomers. With large-scale sequencing becoming increasingly available, more and more people will come across transposable element sequences in their data, and this volume will hopefully help to convince them that transposable elements are not just "junk" DNA, and may actually be the most interesting and fun part of their data!
Analysis Life sciences
Nucleic acids
Cytology
Plant Genetics & Genomics
Plant Biochemistry
Cell Biology
genetica
genetics
celbiologie
cellular biology
chemie
chemistry
genomica
genomics
plantengenetica
plant genetics
plantensamenstelling
plant composition
biochemie
biochemistry
Genetics (General)
Genetica (algemeen)
Bibliography Includes bibliographical references and index
Notes English
Subject Insertion elements, DNA.
Mutagens.
Plant genetic regulation.
Transposons.
Plant molecular genetics.
Genetic regulation.
DNA Transposable Elements
Gene Expression Regulation
Mutagens
Plants -- genetics
SCIENCE -- Life Sciences -- Genetics & Genomics.
Genetic regulation
Insertion elements, DNA
Mutagens
Plant genetic regulation
Plant molecular genetics
Transposons
Pflanzen
Transponierbares Element
Form Electronic book
Author Grandbastien, Marie-Angèle
Casacuberta, Josep M
ISBN 9783642318429
3642318428
364231841X
9783642318412
3642437591
9783642437595