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Author WABI (Workshop) (6th : 2006 : Zurich, Switzerland)

Title Algorithms in bioinformatics : 6th international workshop, WABI 2006, Zurich, Switzerland, September 11-13, 2006 : proceedings / Philipp Bücher, Bernard M.E. Moret (eds.)
Published Berlin ; New York : Springer, ©2006

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Description 1 online resource (xii, 402 pages) : illustrations
Series Lecture notes in computer science, 0302-9743 ; 4175. Lecture notes in bioinformatics
Lecture notes in computer science ; 4175.
Lecture notes in computer science. Lecture notes in bioinformatics.
Contents Measures of Codon Bias in Yeast, the tRNA Pairing Index and Possible DNA Repair Mechanisms -- Decomposing Metabolomic Isotope Patterns -- A Method to Design Standard HMMs with Desired Length Distribution for Biological Sequence Analysis -- Efficient Model-Based Clustering for LC-MS Data -- A Bayesian Algorithm for Reconstructing Two-Component Signaling Networks -- Linear-Time Haplotype Inference on Pedigrees Without Recombinations -- Phylogenetic Network Inferences Through Efficient Haplotyping -- Beaches of Islands of Tractability: Algorithms for Parsimony and Minimum Perfect Phylogeny Haplotyping Problems -- On the Complexity of SNP Block Partitioning Under the Perfect Phylogeny Model -- How Many Transcripts Does It Take to Reconstruct the Splice Graph? -- Multiple Structure Alignment and Consensus Identification for Proteins -- Procrastination Leads to Efficient Filtration for Local Multiple Alignment -- Controlling Size When Aligning Multiple Genomic Sequences with Duplications -- Reducing Distortion in Phylogenetic Networks -- Imputing Supertrees and Supernetworks from Quartets -- A Unifying View of Genome Rearrangements -- Efficient Sampling of Transpositions and Inverted Transpositions for Bayesian MCMC -- Alignment with Non-overlapping Inversions in O(n 3)-Time -- Accelerating Motif Discovery: Motif Matching on Parallel Hardware -- Segmenting Motifs in Protein-Protein Interface Surfaces -- Protein Side-Chain Placement Through MAP Estimation and Problem-Size Reduction -- On the Complexity of the Crossing Contact Map Pattern Matching Problem -- A Fuzzy Dynamic Programming Approach to Predict RNA Secondary Structure -- Landscape Analysis for Protein-Folding Simulation in the H-P Model -- Rapid ab initio RNA Folding Including Pseudoknots Via Graph Tree Decomposition -- Flux-Based vs. Topology-Based Similarity of Metabolic Genes -- Combinatorial Methods for Disease Association Search and Susceptibility Prediction -- Integer Linear Programs for Discovering Approximate Gene Clusters -- Approximation Algorithms for Bi-clustering Problems -- Improving the Layout of Oligonucleotide Microarrays: Pivot Partitioning -- Accelerating the Computation of Elementary Modes Using Pattern Trees -- A Linear-Time Algorithm for Studying Genetic Variation -- New Constructive Heuristics for DNA Sequencing by Hybridization -- Optimal Probing Patterns for Sequencing by Hybridization -- Gapped Permutation Patterns for Comparative Genomics -- Segmentation with an Isochore Distribution
Bibliography Includes bibliographical references and index
Notes English
Subject Bioinformatics -- Congresses
Computer algorithms -- Congresses
Computational biology.
Bioinformatics.
Computer algorithms.
Algorithms.
Computational Biology
Algorithms
algorithms.
Informatique.
Computational biology
Algorithms
Bioinformatics
Computer algorithms
Genre/Form proceedings (reports)
Conference papers and proceedings
Conference papers and proceedings.
Actes de congrès.
Form Electronic book
Author Bücher, Philipp.
Moret, B. M. E. (Bernard M. E.)
ISBN 9783540395836
3540395830
9783540395843
3540395849
Other Titles WABI 2006