| Description |
1 online resource (xiii, 332 pages) : illustrations |
| Series |
Lecture notes in computer science, 0302-9743 ; 7292. Lecture notes in bioinformatics |
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LNCS sublibrary. SL 8, Bioinformatics |
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Lecture notes in computer science ; 7292.
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Lecture notes in computer science. Lecture notes in bioinformatics.
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LNCS sublibrary. SL 8, Bioinformatics.
|
| Contents |
Trie-based Apriori Motif Discovery Approach / Isra Al-Turaiki, Ghada Badr and Hassan Mathkour -- Inapproximability of (1,2)-Exemplar Distance / Laurent Bulteau and Minghui Jiang -- A Mixed Integer Programming Model for the Parsimonious Loss of Heterozygosity Problem / Daniele Catanzaro, Martine Labbé and Bjarni V. Halldórsson -- Reconstruction of Transcription Regulatory Networks by Stability-Based Network Component Analysis / Xi Chen, Chen Wang, Ayesha N. Shajahan, Rebecca B. Riggins and Robert Clarke, et al. -- A Transcript Perspective on Evolution / Yann Christinat and Bernard M.E. Moret -- A Fast Algorithm for Computing the Quartet Distance for Large Sets of Evolutionary Trees / Ralph W. Crosby and Tiffani L. Williams -- Error Propagation in Sparse Linear Systems with Peptide-Protein Incidence Matrices / Peter Damaschke and Leonid Molokov -- Models and Algorithmic Tools for Computational Processes in Cellular Biology: Recent Developments and Future Directions / Bhaskar DasGupta -- Identifying Rogue Taxa through Reduced Consensus: NP-Hardness and Exact Algorithms / Akshay Deepak, Jianrong Dong and David Fernández-Baca -- Analytics Approaches for the Era of 10,000* Genomes *and Counting / Cynthia J. Gibas -- GTP Supertrees from Unrooted Gene Trees: Linear Time Algorithms for NNI Based Local Searches / Paweł Górecki, J. Gordon Burleigh and Oliver Eulenstein |
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A Robinson-Foulds Measure to Compare Unrooted Trees with Rooted Trees / Paweł Górecki and Oliver Eulenstein -- P-Binder: A System for the Protein-Protein Binding Sites Identification / Fei Guo, Shuai Cheng Li and Lusheng Wang -- Non-identifiable Pedigrees and a Bayesian Solution / Bonnie Kirkpatrick -- Iterative Piecewise Linear Regression to Accurately Assess Statistical Significance in Batch Confounded Differential Expression Analysis / Juntao Li, Kwok Pui Choi and R. Krishna Murthy Karuturi -- Reconstruction of Network Evolutionary History from Extant Network Topology and Duplication History / Si Li, Kwok Pui Choi, Taoyang Wu and Louxin Zhang -- POPE: Pipeline of Parentally-Biased Expression / Victor Missirian, Isabelle Henry, Luca Comai and Vladimir Filkov -- On Optimizing the Non-metric Similarity Search in Tandem Mass Spectra by Clustering / Jiří Novák, David Hoksza, Jakub Lokoč and Tomáš Skopal -- On the Comparison of Sets of Alternative Transcripts / Aïda Ouangraoua, Krister M. Swenson and Anne Bergeron -- MURPAR: A Fast Heuristic for Inferring Parsimonious Phylogenetic Networks from Multiple Gene Trees / Hyun Jung Park and Luay Nakhleh -- Large Scale Ranking and Repositioning of Drugs with Respect to DrugBank Therapeutic Categories / Matteo Re and Giorgio Valentini |
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Score Based Aggregation of microRNA Target Orderings / Debarka Sengupta, Ujjwal Maulik and Sanghamitra Bandyopadhyay -- Modeling Complex Diseases Using Discriminative Network Fragments / Ambuj K. Singh -- Novel Multi-sample Scheme for Inferring Phylogenetic Markers from Whole Genome Tumor Profiles / Ayshwarya Subramanian, Stanley Shackney and Russell Schwartz -- Algorithms for Knowledge-Enhanced Supertrees / André Wehe, J. Gordon Burleigh and Oliver Eulenstein -- Improvement of BLASTp on the FPGA-Based High-Performance Computer RIVYERA / Lars Wienbrandt, Daniel Siebert and Manfred Schimmler -- A Polynomial Time Solution for Protein Chain Pair Simplification under the Discrete Fréchet Distance / Tim Wylie and Binhai Zhu -- Designing RNA Secondary Structures in Coding Regions / Rukhsana Yeasmin and Steven Skiena -- Phylogenetic Tree Reconstruction with Protein Linkage / Junjie Yu, Henry Chi Ming Leung, Siu Ming Yiu, Yong Zhang and Francis Y.L. Chin, et al. -- Protein Structure Prediction and Clustering Using MUFOLD / Jingfen Zhang and Dong Xu -- Computational Modeling of Mammalian Promoters / Michael Q. Zhang |
| Summary |
Annotation This book constitutes the refereed proceedings of the International Symposium on Bioinformatics Research and Applications, ISBRA 2012, held in Dallas, Texas, USA, in May 2012. The 26 revised full papers presented together with five invited talks were carefully reviewed andselected from 66 submissions. The papers address issues on various aspects of bioinformatics and computational biology and their applications |
| Analysis |
Computer science |
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Computer software |
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Bioinformatics |
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Computational Biology/Bioinformatics |
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Data Mining and Knowledge Discovery |
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Information Systems Applications (incl. Internet) |
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Algorithm Analysis and Problem Complexity |
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Pattern Recognition |
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Computer Appl. in Life Sciences |
| Bibliography |
Includes bibliographical references and author index |
| Subject |
Bioinformatics -- Congresses
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Informatique.
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Bioinformatics
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| Genre/Form |
Conference papers and proceedings
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Software.
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| Form |
Electronic book
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| Author |
Bleris, Leonidas.
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| ISBN |
9783642301919 |
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3642301916 |
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3642301908 |
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9783642301902 |
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